Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855942.1_cds_XP_016512981.1_25567
CDS Infomation

[gene=LOC107830021] [db_xref=GeneID:107830021] [protein=phosphoinositide phosphatase SAC8-like isoform X2] [protein_id=XP_016512981.1] [location=join(2506..2659,2756..2830,4185..4312,4419..4510,4600..4657,5084..5140,5315..5348,5471..5551,5648..5754,7958..8044,8124..8201,8668..8732,9208..9306,9430..9529,9666..9774,9862..9934,10018..10111,10213..10299,10654..10720,10859..10983)] [gbkey=CDS]
Sequence

ATGGAAATTGAAGCAAATTCAATTCAGCATTTTAAGCTATGGAGCCAATTGGAATTACAG
GAATTTTCAGACAAATTCGTTATTCGGTCAACGGAATCTCCTATTGAAGGCTTCTCCGTT
AGCCGCTTCGATGGAACCATCGAGAAGCTCAACGGTGATATGAGCTTTGGAAATCCTTCA
AAAGTCTCTACGATTTATGGAGTCGCTGGAACAATTAGGTTGTTGGCAGGATCACATATA
TTGTTAATAACTTCCAGGAAGGAAGTGGGTAACTATCTTGGTTTTCCTGTTTTTCGTGTG
ATGTCCATGAAGTTTCTTTCATGCAATGAGGCCTCAACACGTCTAACAAGTGAAGAAAAA
AAAGATGAAGCTTACTTCATGAATTTGTTGAGAGTAGTGGAATCAACTCCAGGCTTGTAT
TATTCCTATGAAACAGATATAACACTGAACTTGCAGAGAAGATGCAATTTGGCAAAAGGG
TGGATGAGTAAACCAGTTTGGAAGCAGGCTGATCCGCGGTTTGTTTGGAACAAAAATCTG
TTGGAGGAACTGATTGAAAATAAGCTCGATGGATTCATCATTCCTCTTTTGCAAGGAAGC
TTTCAGACTGGACATCTTAAACTCAAAGAATCACCCGCTACCATAGCATTGATTTCAAGG
AGATGCACGCGACGCTTGGGGACACGAATGTGGAGAAGAGGGGCTAATCTAGAAGGAGAC
ACTGCTAATTTTATTGAAACTGAGCAGTTGCTGGAGTTTGAAGGTTTCAGGTCTTCTTTT
TTGCAAGTTCGAGGTTCTATTCCACTCTTGTGGGAGCAAATAGTTGATTTGAGCTATAAA
CCACGGCTTAATATTATCTATCATGGGGAAACACCGAAAGTTGTGGAGCGCCACTTTCAT
GATCTTTTGCAAAGATATGGCGATGTCATTGCAGTTGACTTGACAAACAAGCTAGGTGAT
GAGGGTCTATTAAGTTCAGCTTATGCAACAGAAATTCAAAAGCTATCAAGTGTGAGATAT
GTGTCGTTTGACTTTCATCACTGTTGTGGGGGCTCAAACTTTGAAAACATACAACTTCTG
TTTGATCAGATCTCTGAGGATTTTGAGAAGCACGGATACTTCCTCATAGACACAGAAGAG
CAGATATTAGCGAAGCAGAGAGGAGTTATTAGATCGAACTGCATTGACTGCCTAGATCGA
ACAAATGTTACTCAGAGCTACCTGGCTCAGAAGTCTTTGAATTCACAACTGCAAAGACTT
GGTGCACTTTCATCGAATGAGTGCATTTCTATGTTCAGTGAAGATTTTGAAATCTTTAGG
ACTATGTGGGTGGATCAAGGTGATGAAATCAGCCTGGAATATTCTGGAACACATGCTCTA
AAGCGGGATCTTGTCAGATATGGAAAACAGACTATGACAGGACTTATACAAGATGGGATG
AGTGCCCTTTCAAGATACTTCTTGAACAATTTTCAGGATGGAGTTCGTCAGGATGCAATG
GACCTTATAAGTGGTCGCTATAGTGTTAACAGGGGAAGCCCCTCCCGCGTCCAGCATAGT
GGATTAGAATCACTCAGTTATCTACCTGTAGCATCAGCTCTTTTAATTGGAGGATTGACC
GTGACCACCATCACGATAAACCAAGGACGAAATACAAATACCTATTTGTCCTCTGTGCTC
TGTGCTGGTGTAACTGCTGGAGTTATGGCAATTGTCAAAGCAAATGGAAGGCAAATCTGC
TCAAGACCTCGATTATGTGGACTGCTGTAA

Peptide Sequence

PEP ID

XP_016512981.1
PEP Infomation

PREDICTED: phosphoinositide phosphatase SAC8-like isoform X2 [Nicotiana tabacum]
Sequence

MEIEANSIQHFKLWSQLELQEFSDKFVIRSTESPIEGFSVSRFDGTIEKLNGDMSFGNPS
KVSTIYGVAGTIRLLAGSHILLITSRKEVGNYLGFPVFRVMSMKFLSCNEASTRLTSEEK
KDEAYFMNLLRVVESTPGLYYSYETDITLNLQRRCNLAKGWMSKPVWKQADPRFVWNKNL
LEELIENKLDGFIIPLLQGSFQTGHLKLKESPATIALISRRCTRRLGTRMWRRGANLEGD
TANFIETEQLLEFEGFRSSFLQVRGSIPLLWEQIVDLSYKPRLNIIYHGETPKVVERHFH
DLLQRYGDVIAVDLTNKLGDEGLLSSAYATEIQKLSSVRYVSFDFHHCCGGSNFENIQLL
FDQISEDFEKHGYFLIDTEEQILAKQRGVIRSNCIDCLDRTNVTQSYLAQKSLNSQLQRL
GALSSNECISMFSEDFEIFRTMWVDQGDEISLEYSGTHALKRDLVRYGKQTMTGLIQDGM
SALSRYFLNNFQDGVRQDAMDLISGRYSVNRGSPSRVQHSGLESLSYLPVASALLIGGLT
VTTITINQGRNTNTYLSSVLCAGVTAGVMAIVKANGRQICSRPRLCGLL

Transcript Sequence

Gene sequence data has not been registered.